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slidebook software  (Oxford Instruments)


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    Structured Review

    Oxford Instruments slidebook software
    Slidebook Software, supplied by Oxford Instruments, used in various techniques. Bioz Stars score: 99/100, based on 44673 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/slidebook+software/Imaris/pmc11844255-388-4-12
    Average 99 stars, based on 44673 article reviews
    slidebook software - by Bioz Stars, 2026-11
    99/100 stars

    Images

    Related Articles

    Software:

    Article Title: The Golgi complex governs natural killer cell lytic granule positioning to promote directionality in cytotoxicity.
    Article Snippet: Data were acquired with Slidebook software (Intelligent Imaging Systems) and analyzed using Imaris (Oxford instruments) or ImageJ (Fiji) software. .. Data were acquired with Slidebook software (Intelligent Imaging Systems) and analyzed using Imaris (Oxford instruments) or ImageJ (Fiji) software. .. In brief, 3D 18 Cell Reports 44, 115156, January 28, 2025 reconstructions were generated using Imaris software, and the tool for spotsmeasurement was utilized to identify LGs and render the signal from Perforin and MTOC (using maximum a-Tubulin signal which has been validated as alternative to pericentrin51).

    Article Title: The Golgi complex governs natural killer cell lytic granule positioning to promote directionality in cytotoxicity
    Article Snippet: For all experiments, cells were visualized and images were acquired on a Zeiss Axioplan Observer Z1 with Yokigawa CSU-W1 T2 50μm spinning disk and 63X 1.49 NA objective. .. Data were acquired with Slidebook software (Intelligent Imaging Systems) and analyzed using Imaris (Oxford instruments) or ImageJ (Fiji) software. .. Data were acquired with Slidebook software (Intelligent Imaging Systems) and analyzed using Imaris (Oxford instruments) or ImageJ (Fiji) software.

    Article Title: SLC38A2 and glutamine signalling in cDC1s dictate anti-tumour immunity
    Article Snippet: Coverslips were mounted in Vectashield Vibrance (Vector Labs), and images were acquired using a Marianas spinning disk confocal microscope (Intelligent Imaging Innovations) equipped with SoRa (Yokagawa), Prime 95B CMOS camera (Photometrics) and a 1.45 NA 100× oil objective. .. Images were acquired using Slidebook software (version 6.0.24; 3i) and analysed using Imaris software (version x64 9.5.1; Bitplane). ..

    Article Title: SLC38A2 and glutamine signalling in cDC1s dictate anti-tumour immunity.
    Article Snippet: Coverslips were mounted in Vectashield Vibrance (Vector Labs), and images were acquired using a Marianas spinning disk confocal microscope (Intelligent Imaging Innovations) equipped with SoRa (Yokagawa), Prime 95B CMOS camera (Photometrics) and a 1.45 NA 100× oil objective. .. Images were acquired using Slidebook software (version 6.0.24; 3i) and analysed using Imaris software (version x64 9.5.1; Bitplane). ..

    Article Title: Nucleoporin foci are stress‐sensitive condensates dispensable for C. elegans nuclear pore assembly
    Article Snippet: .. Images were exported from Slidebook software and further analyzed using ImageJ or Imaris image analysis software. ..

    Article Title: Endophilin B2 facilitates endosome maturation in response to growth factor stimulation, autophagy induction, and influenza A virus infection
    Article Snippet: .. Fluorescence images were obtained using an OLYMPUS IX81 deconvolution microscope (60x PLAN SAPO oil immersion objective, NA=1.35; 40x PLAN FLUORITE oil immersion objective, NA=1.30) equipped with a Hamamatsu ORCA-R2 Digital CCD camera (#C10600-10B) or a Leica AOBS SP8 laser-scanning confocal microscope (40x PLANAPOCHROMAT, NA=1.3 oil immersion objective), deconvolved using SlideBook software (Intelligent Imaging Innovations) or Huygens deconvolution software (Scientific Volume Imaging), and analyzed using SlideBook software or and Imaris software (Bitplane). .. Cell viability and apoptosis assays Cell viability was measured by 3-(4,5- dimethylthiazol-2-yl)-5-(3-carboxymethoxyphenyl)2-(4-sulfophenyl)-2H-tetrazolium (MTS) (Promega, #G3582), Sulforhodamine B (SRB) (Sigma, #S1402) and PrestoBlue (Thermo-Fisher Scientific, #A-13261) assays according to manufacturer’s protocols.

    Imaging:

    Article Title: The Golgi complex governs natural killer cell lytic granule positioning to promote directionality in cytotoxicity.
    Article Snippet: Data were acquired with Slidebook software (Intelligent Imaging Systems) and analyzed using Imaris (Oxford instruments) or ImageJ (Fiji) software. .. Data were acquired with Slidebook software (Intelligent Imaging Systems) and analyzed using Imaris (Oxford instruments) or ImageJ (Fiji) software. .. In brief, 3D 18 Cell Reports 44, 115156, January 28, 2025 reconstructions were generated using Imaris software, and the tool for spotsmeasurement was utilized to identify LGs and render the signal from Perforin and MTOC (using maximum a-Tubulin signal which has been validated as alternative to pericentrin51).

    Article Title: The Golgi complex governs natural killer cell lytic granule positioning to promote directionality in cytotoxicity
    Article Snippet: For all experiments, cells were visualized and images were acquired on a Zeiss Axioplan Observer Z1 with Yokigawa CSU-W1 T2 50μm spinning disk and 63X 1.49 NA objective. .. Data were acquired with Slidebook software (Intelligent Imaging Systems) and analyzed using Imaris (Oxford instruments) or ImageJ (Fiji) software. .. Data were acquired with Slidebook software (Intelligent Imaging Systems) and analyzed using Imaris (Oxford instruments) or ImageJ (Fiji) software.

    Article Title: Endophilin B2 facilitates endosome maturation in response to growth factor stimulation, autophagy induction, and influenza A virus infection
    Article Snippet: .. Fluorescence images were obtained using an OLYMPUS IX81 deconvolution microscope (60x PLAN SAPO oil immersion objective, NA=1.35; 40x PLAN FLUORITE oil immersion objective, NA=1.30) equipped with a Hamamatsu ORCA-R2 Digital CCD camera (#C10600-10B) or a Leica AOBS SP8 laser-scanning confocal microscope (40x PLANAPOCHROMAT, NA=1.3 oil immersion objective), deconvolved using SlideBook software (Intelligent Imaging Innovations) or Huygens deconvolution software (Scientific Volume Imaging), and analyzed using SlideBook software or and Imaris software (Bitplane). .. Cell viability and apoptosis assays Cell viability was measured by 3-(4,5- dimethylthiazol-2-yl)-5-(3-carboxymethoxyphenyl)2-(4-sulfophenyl)-2H-tetrazolium (MTS) (Promega, #G3582), Sulforhodamine B (SRB) (Sigma, #S1402) and PrestoBlue (Thermo-Fisher Scientific, #A-13261) assays according to manufacturer’s protocols.

    other:

    Article Title: Multiple mechanisms prevent ectopic condensation of FG nucleoporins in the cytoplasm
    Article Snippet: For live imaging of yeast, cells were grown overnight in synthetic dropout media (Thermo Fisher cat # DF0919-15-3) at 30°C and imaged in log-phase (OD 600 of ~0.5) at room temperature.

    Article Title: The Bif-1-Dynamin 2 membrane fission machinery regulates Atg9-containing vesicle generation at the Rab11-positive reservoirs
    Article Snippet: 3D images were taken at 30-sec intervals using a Leica AOBS SP8 laser-scanning confocal microscope with a heated CO 2 chamber.

    Fluorescence:

    Article Title: Endophilin B2 facilitates endosome maturation in response to growth factor stimulation, autophagy induction, and influenza A virus infection
    Article Snippet: .. Fluorescence images were obtained using an OLYMPUS IX81 deconvolution microscope (60x PLAN SAPO oil immersion objective, NA=1.35; 40x PLAN FLUORITE oil immersion objective, NA=1.30) equipped with a Hamamatsu ORCA-R2 Digital CCD camera (#C10600-10B) or a Leica AOBS SP8 laser-scanning confocal microscope (40x PLANAPOCHROMAT, NA=1.3 oil immersion objective), deconvolved using SlideBook software (Intelligent Imaging Innovations) or Huygens deconvolution software (Scientific Volume Imaging), and analyzed using SlideBook software or and Imaris software (Bitplane). .. Cell viability and apoptosis assays Cell viability was measured by 3-(4,5- dimethylthiazol-2-yl)-5-(3-carboxymethoxyphenyl)2-(4-sulfophenyl)-2H-tetrazolium (MTS) (Promega, #G3582), Sulforhodamine B (SRB) (Sigma, #S1402) and PrestoBlue (Thermo-Fisher Scientific, #A-13261) assays according to manufacturer’s protocols.

    Microscopy:

    Article Title: Endophilin B2 facilitates endosome maturation in response to growth factor stimulation, autophagy induction, and influenza A virus infection
    Article Snippet: .. Fluorescence images were obtained using an OLYMPUS IX81 deconvolution microscope (60x PLAN SAPO oil immersion objective, NA=1.35; 40x PLAN FLUORITE oil immersion objective, NA=1.30) equipped with a Hamamatsu ORCA-R2 Digital CCD camera (#C10600-10B) or a Leica AOBS SP8 laser-scanning confocal microscope (40x PLANAPOCHROMAT, NA=1.3 oil immersion objective), deconvolved using SlideBook software (Intelligent Imaging Innovations) or Huygens deconvolution software (Scientific Volume Imaging), and analyzed using SlideBook software or and Imaris software (Bitplane). .. Cell viability and apoptosis assays Cell viability was measured by 3-(4,5- dimethylthiazol-2-yl)-5-(3-carboxymethoxyphenyl)2-(4-sulfophenyl)-2H-tetrazolium (MTS) (Promega, #G3582), Sulforhodamine B (SRB) (Sigma, #S1402) and PrestoBlue (Thermo-Fisher Scientific, #A-13261) assays according to manufacturer’s protocols.



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